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convert gene id to gene symbol in R

Xerothermic Xenomorph answered on October 6, 2020 Popularity 4/10 Helpfulness 5/10

answer convert gene id to gene symbol in R

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convert gene id to gene symbol in R

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library("org.Hs.eg.db") # remember to install it if you don't have it already
symbols <- mapIds(org.Hs.eg.db, keys = ensemblsIDS, keytype = "ENSEMBL", column="SYMBOL")

Popularity 4/10 Helpfulness 5/10 Language html

Source: bioinformatics.stackexchange.com

Tags: html r

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Contributed on Oct 06 2020

Xerothermic Xenomorph

0 Answers Avg Quality 2/10

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convert gene id to gene symbol in R

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library("biomaRt")
ensembl = useMart("ensembl",dataset="hsapiens_gene_ensembl")
getBM(attributes='hgnc_symbol', 
      filters = 'ensembl_gene_id', 
      values = ensemblsIDS, 
      mart = ensembl)

Popularity 4/10 Helpfulness 4/10 Language html

Source: bioinformatics.stackexchange.com

Tags: html r

Link to this answer
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Contributed on Oct 06 2020

Xerothermic Xenomorph

0 Answers Avg Quality 2/10

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convert gene id to gene symbol in R

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convert gene id to gene symbol in R

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convert gene id to gene symbol in R

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