params {
config_profile_description = 'The University of Eastern Finland SLURM cluster profile'
config_profile_contact = 'Oskari Timonen'
config_profile_url = ''
}
singularity {
enabled = true
autoMounts = true
cacheDir = "/some/fast/directory/for/apptainer/containers"
}
process {
executor = 'slurm'
queue = 'small'
queueSize = 16
maxSubmitJobs = 20
errorStrategy = 'retry'
maxRetries = 5
retry.delay = '1min'
time = '1.d'
cpus = 8
memory = '20 GB'
clusterOptions = '--job-name=nfSLURM \
--output=/directory/for/slurm/outputs/2024-03-08_output.txt \
--error=/directory/for/slurm/error/outputs/2024-03-08_log-error.txt \
}
params {
max_memory = 50.GB
max_cpus = 32
max_time = 3.d
}