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Create ANI_for_name.tab for retrieving name in bacterial assembly

Faithful Fox answered on October 19, 2022 Popularity 1/10 Helpfulness 1/10

answer Create ANI_for_name.tab for retrieving name in bacterial assembly

Create ANI_for_name.tab for retrieving name in bacterial assembly

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paste -d $'\t' <(cut -f 1 -d $'\t' ANI.tab | cut -d'.' -f1) <(cut -f 2 -d $'\t' ANI.tab | rev| cut -d'/' -f1 | rev | sed 's|_[A-Z,a-z].*||') > ANI_for_name.tab
bash '/media/kt/data/TRUNG/2.Tool/code_linh_tinh/retrieve_name.sh' ANI_for_name.tab assembly

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Contributed on Oct 19 2022

Faithful Fox

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Create ANI_for_name.tab for retrieving name in bacterial assembly

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