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python logistic regression

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Innocent Iguana answered on May 23, 2020 Popularity 10/10 Helpfulness 2/10

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python logistic regression

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from statsmodels.formula.api import logit
model = logit("target ~ x_var", data=df).fit()
print(model.params)
# Visualize logistic model
sns.regplot(x="x_var", y="target", data=df, ci=None, logistic=True)
X_test = pd.DataFrame({"x_var": np.arange(-1, 6.25, 0.25)})
y_pred_prob = model.predict(X_test)
y_pred = np.round(y_pred_prob)
# Odds ratio : p/(1-p) or probability of something happenning over not happening
odds_ratio = y_pred_prob / (1- y_pred_prob)
# Visualize odds ratio / log odds ratio
sns.lineplot(x="x_var", y="odds_ratio", data=df)
plt.axhline(y=1, linestyle="dotted")
plt.yscale("log") # If you want to make the curve into linear make y : np.log(odds_ratio)
plt.show()
# Confusion matrix
conf_matrix = model.pred_table()
TN = conf_matrix[0,0]
TP = conf_matrix[1,1]
FN = conf_matrix[1,0]
FP = conf_matrix[0,1]
# Visualize confusion matrix
from statsmodels.graphics.mosaicplot import mosaic
mosaic(conf_matrix)

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Contributed on Dec 23 2023

Innocent Iguana

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logistic regression algorithm in python

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# import the class
from sklearn.linear_model import LogisticRegression

# instantiate the model (using the default parameters)
logreg = LogisticRegression()

# fit the model with data
logreg.fit(X_train,y_train)

#
y_pred=logreg.predict(X_test)

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Contributed on May 23 2020

Wide-eyed Whale

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logistic regression algorithm

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# Import the necessary modules
from sklearn.linear_model import LogisticRegression
from sklearn.metrics import confusion_matrix, classification_report

# Create training and test sets
X_train, X_test, y_train, y_test = train_test_split(X, y, test_size = 0.4, random_state=42)

# Create the classifier: logreg
logreg = LogisticRegression()

# Fit the classifier to the training data
logreg.fit(X_train, y_train)

# Predict the labels of the test set: y_pred
y_pred = logreg.predict(X_test)

# Compute and print the confusion matrix and classification report
print(confusion_matrix(y_test, y_pred))
print(classification_report(y_test, y_pred))

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Contributed on Jun 07 2022

josh.ipynb

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logistic regression python

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from sklearn.metrics import confusion_matrix
# Specify independent and dependent features
X = np.asarray(df[['A', 'B', 'C', 'D', 'E', 'F', 'G']])
y = np.asarray(df['target'])

# Preprocess dataset
from sklearn import preprocessing
X = preprocessing.StandardScaler().fit(X).transform(X)

# Split into train and test set
from sklearn.model_selection import train_test_split
X_train, X_test, y_train, y_test = train_test_split( X, y, test_size=0.2, random_state=4)

# Train the model
from sklearn.linear_model import LogisticRegression
LR = LogisticRegression(C=0.01, solver='liblinear')
LR.fit(X_train,y_train)

# Predict the test set
y_pred = LR.predict(X_test)

# See classification report and confusion matrix
from sklearn.metrics import classification_report, confusion_matrix
classification_report(y_test, y_pred)
confusion_matrix(y_test, y_pred, labels=[1,0])

# Predicted probability on test set for positive/target class
y_pred_prob = LR.predict_proba(X_test)[:, 1]

# Evaluate the model
from sklearn.metrics import jaccard_score
jaccard_score(y_test, y_pred,pos_label=0)

from sklearn.metrics import log_loss
log_loss(y_test, y_pred_prob)

from sklearn.metrics import roc_auc_score
print(roc_auc_score(y_test, y_pred_prob))

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Contributed on Feb 13 2023

Innocent Iguana

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logistic regression algorithm in python

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# import the metrics class
from sklearn import metrics
cnf_matrix = metrics.confusion_matrix(y_test, y_pred)
cnf_matrix

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Contributed on May 23 2020

Wide-eyed Whale

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logistic regression

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- It is a classification problem
- It is called regression because it calculates continuous value (sigmoid / likelihood /probability) 
- It compares threshold value with probability to reach conclusion 
- It works well for data with 2 class that is linearly separable by a line (decision boundary)
- For multiple classes, use softmax
- Logistic regression only calculates probability of positive (target) class only. subtracting from 1 will give us probability of negative class
- Training process:
    1. Initializes theta (co-efficients) with random values
    2. Calculate sigmoid (probability) of output for a case
    3. compare this probability with actual output and record this difference as error
    4. Calculate this error for all training cases. Total error is the cost of the model (known as cost function. eg: MSE)
    5. Change theta in such a way that it reduces total cost (optimization algorithm like gradient descent)
    6. Iterate from step 2 until the model is satisfactory enough with low cost.

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Contributed on Feb 13 2023

Innocent Iguana

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why logistic regression instead of linear regression

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Why don't we use linear regression for classification as well?

Linear regression:
- Finds a line that fits and aligns tightly with the data
- goal: line is the trend, any new value will appear *ON* the line
- Predicts the value itself
- Predicted value is a continuous value that exceeds 0 or 1
Logistic regression
- Finds a line / plane that separates the data by maximizing the distance
- goal : Line is a no-man's land. New value will appear on *EITHER SIDE* of the line
- predicts which class will the value fall in (sigmoid of the value).
- Predicted value is a discrete value that should be between 0 or 1
- construction: https://vitalflux.com/wp-content/uploads/2022/03/logistic-regression-model-3.png

Things will be more clearer when we look at the loss function 
- regression loss : 
    - loss is higher when it is further away from true target value. 
    - loss happens both ways (since it is continuous value).
    - squared loss curve perfectly captures this behavior
    - Goal : Capture the closeness of values to the original continuous value on both side (positive or negative)
- logistic loss: 
    - loss is higher only for incorrect classifications. 
    - loss happens in one direction (since it is binary classification.)
    - squared loss captures only one direction correctly, the other direction mistakes as "the perfect model also has squared loss, and so the perfect model is the worst model"
    - Goal : Capture the probability of the incorrectly classified values on incorrect side (sign does not matter as long as the dicrete value is an incorrect value. Correct value has 0 loss)
    - we need to eliminate the mistaken side by introducing the logistic function, that only takes range from 0 to 1.

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Contributed on Feb 12 2023

Innocent Iguana

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Logistic Regression in python

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import numpy as np

class LogisticRegression:
    def __init__(self, learning_rate=0.01, num_iterations=10000):
        self.learning_rate = learning_rate
        self.num_iterations = num_iterations
        self.weights = None
        self.bias = None
    
    def fit(self, X, y):
        # initialize weights and bias to zero
        self.weights = np.zeros(X.shape[1])
        self.bias = 0
        
        # gradient descent
        for i in range(self.num_iterations):
            z = np.dot(X, self.weights) + self.bias
            y_pred = self.sigmoid(z)
            
            # calculate gradients
            dw = (1 / X.shape[0]) * np.dot(X.T, (y_pred - y))
            db = (1 / X.shape[0]) * np.sum(y_pred - y)
            
            # update weights and bias
            self.weights -= self.learning_rate * dw
            self.bias -= self.learning_rate * db
    
    def predict(self, X):
        z = np.dot(X, self.weights) + self.bias
        y_pred = self.sigmoid(z)
        return np.round(y_pred)
    
    def sigmoid(self, z):
        return 1 / (1 + np.exp(-z))

more on : https://pieriantraining.com/machine-learning-with-python-logistic-regression-for-binary-classification/

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Source: pieriantraining.com

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Contributed on Apr 13 2023

Space Cadet

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logistic regression sklearn

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LogisticRegression(penalty='l2',C=1.0, fit_intercept=True, max_iter=100)

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Contributed on Jun 01 2022

VIvek

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python logistic regression

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